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Try using Help->Send Feedback or calling Omni @ 1-800-315-OMNI for help. They don't necessarily see forum posts right away -- it's here for users to help each other, not as their primary contact mechanism.

I was able to place magnets exactly where I wanted them along one whole side of a rectangle without incident, and couldn't find any combination of settings that produced the behavior you report. Got the guides at the 1/4 points, but they had no effect on placement.