[Lizard]

We are trying hard to figure this out. The only pattern we've found so far is that some people can avoid it if they use "Quit and Discard Windows" instead of Quit. So it's likely something in OmniFocus fighting with Lion's attempt to restore windows.

If you are experiencing this, please contact our ninjas (omnifocus@omnigroup.com) so we can get more data to figure out why it's happening and how to fix it.

Thanks!