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Just wondering if there has been any update on this problem? I tried the proposed solution of Quitting and Closing All Windows - didn't work. Here's the email I just sent to the support ninjas:

I just re-started using Omnifocus after a few years' hiatus (the to do list was never very long for a few years), and since starting up again I constantly run into hangs and delays - as if Omnifocus were frozen, but then I switch focus on windows or click the mouse around the OF window and eventually the program becomes responsive again (like 15-30 seconds later). I have only been using OF again since some time in February, and my backup database file is only 111 KB. I sync with my iPhone and iPad through Omni's free service, and those devices have basically not had any problems (one "could not execute xml" or similar error on the iPad, but a re-sync with the "overwrite local db with synced db" option fixed the problem). This hanging was happening 1-2 times a day, but since installing a new hard drive and reinstalling OF from scratch (everything was done manually - no Mac Migration Assistant) and syncing my db from Omni's free sync service, it seems to have become worse. I am running OS X 10.7.5, 8GB RAM on a 2.7 GHz i7 Macbook Pro with close to 200GB free on the HDD.

Any thoughts or tips? Thanks!