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There's some more information in this post, in case it helps.

(Summary version: OmniFocus and Dropbox are two awesome things with designs that conflict somewhat. Dropbox wants one big file you sync around and use on one device at a time, while OmniFocus uses a lot of little files that have a specific relationship so you can do stuff on all your devices in any order.)

Last edited by Brian; 2010-09-22 at 03:34 PM.. Reason: wow, a one-sentence post sounds like a totally jerk-y post.