I'm seeing similar things. I've sent two e-mails to support, the first over three days ago, but haven't had a reply yet.
I don't know where this "progress indicator" you mention is Lizard? All I see is the sync button spinning.
How do I get to the logs? I see no mention of Omnifocus in console, but then I don't know what I'm looking for.
The following is part of the report I sent to support. I'm using MobileMe:
Quote:
Yesterday I added 3 tasks to the inbox, marked several tasks as complete, and edited the title and dates of another, all on the iPhone. I synced several times, apparently successfully, though the very last sync I tried did time out (though there were no changes made between it and the previous sync).
This morning I opened up the desktop version, synced, and found that the only change that had worked was the addition of one task to Inbox - none of the others had worked. Worse still, the iPhone version has now been overwritten by the (older) desktop version, so I've no record of the changes I made.
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Mark