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When I click the red "Close" button, the number of active items is no longer displayed in the dock. Considering clicking Close doesn't actually quit the application, shouldn't the number of active actions remain displayed in the dock?

IMO, this is a fairly annoying behavior and I'm hoping that, at a minimum, you make this a preference on whether the number of actions should be displayed in the dock when the main OmniFocus window is not displayed on the screen.