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You should also contact the support ninjas via email to omnidisksweeper@omnigroup.com or Help->Send Feedback. It's possible the problem has been seen by someone who reported it to them, but didn't post on the forum.

Out of curiosity, as it doesn't really seem like ODS should mess up your disk just by reading it, what happens if you run one of the other similar tools, like GrandPerspective, or even a program that reads all the files on your disk, like SuperDuper doing a full backup? I have to say I'm a bit suspicious that this may be an issue with your SSD, not ODS. Is this an Apple-provided SSD, or 3rd party?